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Publications
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2009
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Dumont, B. L., K. W. Broman, and B. A. Payseur (2009). Variation in genomic recombination rates among heterogeneous stock mice. Genetics, in press.
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Moyle, L. C., and B. A. Payseur (2009). Reproductive isolation grows on trees. Trends in Ecology and Evolution, in press.
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Shim, H., H. Chun, C. D. Engelman, and B. A. Payseur (2009). Genome-wide association studies using SNPs vs. haplotypes: An empirical comparison with data from the North American Rheumatoid Arthritis Consortium. BMC Proceedings, in press.
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Payseur, B. A., and P. Jing (2009). A genome-wide comparison of population structure at STRPs and nearby SNPs in humans. Molecular Biology and Evolution 26:1369-1377. [pdf] & [STRP Genotypes]
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Payseur, B. A. (2009). Y not introgress?
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2008
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Vinyard C. J., and B. A. Payseur (2008). Of “mice” and mammals: Utilizing classical inbred mice to study the genetic architecture of organismal-level function and performance in mammals. Integrative and Comparative Biology doi:10.1093/icb/icn063. [pdf]
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Payseur B. A., M. Place, and J. L. Weber (2008). Linkage Disequilibrium between STRPs and SNPs across the Human Genome. The American Journal of Human Genetics. 82:1039-1050. [pdf] & [STRP Genotypes]
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Dumont B. L., and B. A. Payseur (2008). Evolution of the genomic recombination rate in mammals. Evolution 62(2):276-294. [pdf]
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Teeter K. C., B. A. Payseur, L. W. Harris, M. Bakewell, L. M. Thibodeau, J. E. O'Brien, J. G. Krenz, M. A. Sans-Fuentes, M. W. Nachman, and P. T. Tucker (2008). Genome-wide patterns of gene flow across a house mouse hybrid zone. Genome Research 18(1):67-76. [pdf]
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2007
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Williamson S.H., M. J. Hubisz, A. G. Clark, B. A. Payseur, C. D. Bustamante, and R. Nielsen (2007). Localizing recent adaptive evolution in the human genome. PLoS Genetics 3:e90. [pdf]
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Payseur B. A., and M. Place (2007). Searching the genomes of inbred mouse strains for incompatibilities that separate their wild relatives. Journal of Heredity 98:115-122. [pdf]
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Payseur B. A., and M. Place (2007). Prospects for association mapping in classical inbred strains of mice. Genetics 175:1999-2008. [pdf]
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2006
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Payseur B. A., A. G. Clark, J. Hixson, E. Boerwinkle, and C. F. Sing (2006). Contrasting multi-site genotypic distributions among discordant quantitative phenotypes: the APOA1/C3/A4/A5 gene cluster and cardiovascular disease risk factors. Genetic Epidemiology 30:508-518. [pdf]
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Payseur B. A., and A. D. Cutter (2006). Integrating patterns of polymorphism at SNPs and STRs. Trends in Genetics 22:424-429. [pdf]
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2005
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Payseur B. A., and H. E. Hoekstra (2005). Signatures of reproductive isolation in patterns of single nucleotide diversity across inbred strains of house mice. Genetics 171:1905-1916. [pdf]
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Payseur B. A., and M. W. Nachman (2005). The genomics of speciation: investigating the molecular correlates of X chromosome introgression across the hybrid zone between Mus domesticus and Mus musculus. Biological Journal of the Linnean Society 84:523-534.
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2004
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| Payseur B. A., J. G. Krenz, and M. W. Nachman (2004). Differential patterns of introgression across the X chromosome in a hybrid zone between two species of house mice. Evolution 58:2064-2078. [pdf]
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Storz J. F., B. A. Payseur, and M. W. Nachman (2004). Genome scans of DNA variability in humans reveal evidence of selective sweeps outside of Africa. Molecular Biology and Evolution 21:1800-1811. [pdf]
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Jensen-Seaman M. I., T. S. Furey, B. A. Payseur, Y. Lu, K. M. Roskin, C-F Chen, M. A. Thomas, D. Haussler, and H. J. Jacob (2004). Comparative recombination rates in the rat, mouse, and human genomes. Genome Research 14:528-538. [pdf]
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Rat Genome Sequencing Project Consortium (2004). Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature 428:493-521. [pdf]
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2003
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Cutter A.D., B. A. Payseur, T. Salcedo, A. M. Estes, J. M. Good, E. Wood, T. Hartl, H. Maughan, J. Strempel, B. Wang, A. C. Bryan, and M. Dellos (2003). Molecular correlates of genes exhibiting RNAi phenotypes in Caenorhabditis elegans. Genome Research 13:2651-2657. [pdf]
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Cutter A. D., and B. A. Payseur (2003). Rates of deleterious mutation and the evolution of sex in Caenorhabditis. Journal of Evolutionary Biology 16:812-822. [pdf]
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Cutter A.D., and B. A. Payseur (2003). Selection at linked sites in the partial selfer Caenorhabditis elegans. Molecular Biology and Evolution 20:665-673. [pdf]
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2002
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Payseur B. A., and M. W. Nachman (2002). Natural selection at linked sites in humans. Gene 30:31-42. [pdf]
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Payseur B. A., A. D. Cutter, and M. W. Nachman (2002). Searching for evidence of positive selection in the human genome using patterns of microsatellite variability. Molecular Biology and Evolution 19:1143-1153. [pdf]
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Payseur B. A., and M. W. Nachman (2002). Gene density and human nucleotide polymorphism. Molecular Biology and Evolution 19:336-340. [pdf]
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1999 - 2001
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Yoder A.D., J. A. Irwin, and B. A. Payseur (2001). Failure of the ILD to determine data combinability for slow loris phylogeny. Systematic Biology 50:408-424.
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Payseur B. A., and M. W. Nachman (2000). Microsatellite variation and recombination rate in the human genome. Genetics 156:1285-1298. [pdf]
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Payseur B. A., H. H. Covert, C. J. Vinyard, and M. Dagosto (1999). New body mass estimates for Omomys carteri, a middle Eocene primate from North America. American Journal of Physical Anthropology 109:41-52. [pdf]
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