2024
Haasl, R. J., and B. A. Payseur (2024). Fitness landscapes of human microsatellites. PLoS Genetics 20:e1011524.
Payseur, B. A. (2024). Genetics of recombination rate variation within and between species. Journal of Evolutionary Biology voae158.
Gabriel, S. I., J. J. Hughes, J. S. Herman, J. F. Baines, M. D. Giménez, M. M. Gray, E. A. Hardouin, B. A. Payseur, P. G. Ryan, A. Sánchez-Chardi, R. G. Ulrich, M. da Luz Mathias, and J. B. Searle (2024). House mice in the Atlantic region: genetic signals of their human transport. Genes 15:1645.
Morgan, A. P., and B. A. Payseur (2024). Genetic background affects the strength of crossover interference in house mice. Genetics 228:iyae146.
Frayer, M. E., and B. A. Payseur (2024). Do genetic loci that cause reproductive isolation in the lab inhibit gene flow in nature? Evolution (Editor’s Choice article) 78:1025-1038.
2023
Payseur, B. A., S. Anderson, R. T. James II, M. D. Parmenter, M. M. Gray, and C. J. Vinyard (2023). Genetics of evolved load resistance in the skeletons of unusually large mice from Gough Island. Genetics (Highlighted article) 225:iyad137.
Stratton, J. D., M. J. Nolte, and B. A. Payseur (2023). Genetics of behavioural evolution in giant mice from Gough Island. Proceedings of the Royal Society B 290:20222603.
2022
Booker, T. R., B. A. Payseur, and A. Tigano (2022). Background selection under evolving recombination rates. Proceedings of the Royal Society B 289:20220782.
Johri, P., C. F. Aquadro, M. Beaumont, B. Charlesworth, L. Excoffier, A. Eyre-Walker, P. D. Keightley, M. Lynch, G. McVean, B. A. Payseur, S. P. Pfeifer, W. Stephan, and J. D. Jensen (2022). Recommendations for improving statistical inference in population genomics. PLoS Biology 31:e3001669.
Parmenter, M. D., J. P. Nelson, M. M. Gray, S. E. Weigel, C. J. Vinyard, and B. A. Payseur (2022). A complex genetic architecture underlies mandibular evolution in big mice from Gough Island. Genetics (Highlighted article) 220:iyac023.
2021
Peterson, A. L., and B. A. Payseur (2021). Higher inter-cellular variation in genome-wide recombination rate in female mice. Cytogenetic and Genome Research (Editor’s Choice article) 161:463-469.
Blanckaert, A., and B. A. Payseur (2021). Finding hybrid incompatibilities using genome sequences from hybrid populations. Molecular Biology and Evolution 38:4616-4627.
Frayer, M. E., and B. A. Payseur (2021). Demographic history shapes genomic ancestry in hybrid zones. Ecology and Evolution 11:10290-10302.
Stratton, J. D., M. J. Nolte, and B. A. Payseur (2021). Evolution of boldness and exploratory behavior in giant mice from Gough Island. Behavioral Ecology and Sociobiology 75:1-11.
Peterson, A. L., and B. A. Payseur (2021). Sex-specific variation in the genome-wide recombination rate. Genetics 217:iyaa019.
Payseur, B. A., and P. Jing (2021). Genomic targets of positive selection in giant mice from Gough Island. Molecular Biology and Evolution 38:911-926.
2020
Nolte, M. J., P. Jing, C. N. Dewey, and B. A. Payseur (2020). Giant island mice exhibit widespread gene expression changes in key metabolic organs. Genome Biology and Evolution 12:1277-1301.
Morgan, K., B. Harr, M. A. White, B. A. Payseur, and L. M. Turner (2020). Disrupted gene networks in subfertile hybrid house mice. Molecular Biology and Evolution 37:1547-1562.
Kartje, M. E., P. Jing, and B. A. Payseur (2020). Weak correlation between nucleotide variation and recombination rate across the house mouse genome. Genome Biology and Evolution 12:293-299.
Parmenter, M. D., J. P. Nelson, S. E. Weigel, M. M. Gray, B. A. Payseur, and C. J. Vinyard (2020). Masticatory apparatus performance and functional morphology in the extremely large mice from Gough Island. The Anatomical Record 303:167-179.
2019
Dapper, A. L., and B. A. Payseur (2019). Molecular evolution of the meiotic recombination pathway in mammals. Evolution 73:2368-2389.
Wang, R. J., B. L. Dumont, P. Jing, and B. A. Payseur (2019). A first genetic portrait of synaptonemal complex variation. PLoS Genetics 15:e1008337.
Peterson, A. L., N. D. Miller, and B. A. Payseur (2019). Conservation of the genome-wide recombination rate in white-footed mice. Heredity 123:442-457.
Otto, S. P., and B. A. Payseur (2019). Crossover interference: Shedding light on the evolution of recombination. Annual Review of Genetics 53:19-44.
Jensen, J. D., B. A. Payseur, W. Stephan, C. F. Aquadro, M. Lynch, D. Charlesworth, and B. Charlesworth (2019). The importance of the neutral theory in 1968 and 50 years on: a response to Kern and Hahn 2018. Evolution 73:111-114.
2018
Schwahn, D., R. J. Wang, M. A. White, and B. A. Payseur (2018). Genetic dissection of hybrid male sterility across stages of spermatogenesis. Genetics (Highlighted article) 210:1453-1465.
Payseur, B. A., D. C. Presgraves, and D. Filatov (2018). Introduction: Sex chromosomes and speciation. Molecular Ecology 27:3745-3748.
Hvala, J. A., M. E. Frayer, and B. A. Payseur (2018). Signatures of hybridization and speciation in genomic patterns of ancestry. Evolution 72:1540-1552.
Dapper, A. L., and B. A. Payseur (2018). Effects of demographic history on the detection of recombination hotspots from linkage disequilibrium. Molecular Biology and Evolution 35:335-353.
2017
Dapper, A. L., and B. A. Payseur (2017). Connecting theory and data to understand recombination rate evolution. Philosophical Transactions of the Royal Society B 372: 20160469.
Wang, R. J., and B. A. Payseur (2017). Genetics of genome-wide recombination rate evolution in mice from an isolated island. Genetics 206:1841-1852.
Wang, R. J., M. M. Gray, M. D. Parmenter, K. W. Broman, and B. A. Payseur (2017). Recombination rate variation in mice from an isolated island. Molecular Ecology 26:457-470.
2016
Parmenter, M. D., M. M. Gray, C. A. Hogan, I. N. Ford, K. W. Broman, C. J. Vinyard, and B. A. Payseur (2016). Genetics of skeletal evolution in unusually large mice from Gough Island. Genetics (Highlighted article) 204:1559-1572.
Payseur, B. A. (2016). Genetic links between recombination and speciation. PLoS Genetics 12:e1006066.
Payseur, B. A., and L. H. Rieseberg (2016). A genomic perspective on hybridization and speciation. Molecular Ecology 25:2337-2360.
Gasch, A. P., B. A. Payseur, and J. E. Pool (2016). The power of natural variation for model organism biology. Trends in Genetics 32:147-154.
Haasl, R. J., and B. A. Payseur (2016). Fifteen years of genome-wide scans for selection: trends, lessons, and unaddressed genetic sources of complication. Molecular Ecology 25:5-23.
2015
Wang, R. J., M. A. White, and B. A. Payseur (2015). The pace of hybrid incompatibility evolution in house mice. Genetics 201:229-242.
Gray, M. M., M. D. Parmenter, C. Hogan, I. Ford, R. J. Cuthbert, P. G. Ryan, K. W. Broman, and B. A. Payseur (2015). Genetics of rapid and extreme size evolution in island mice. Genetics (highlighted article) 201:213-228.
2014
Haasl, R. J., R. C. Johnson, and B. A. Payseur (2014). The effects of microsatellite selection on linked sequence diversity. Genome Biology and Evolution 6:1843-1861.
Haasl, R. J., and B. A. Payseur (2014). Remarkable selective constraints on exonic dinucleotide repeats. Evolution 68:2737-2744.
Payseur, B. A. (2014). Disproportionate roles for the X chromosome and proteins in adaptive evolution. Genetics 196:931-935.
Gray, M. M., D. Wegmann, R. J. Haasl, M. A. White, S. I. Gabriel, J. B. Searle, R. J. Cuthbert, P. G. Ryan, and B. A. Payseur (2014). Demographic history of a recent invasion of house mice on the isolated Island of Gough. Molecular Ecology 23:1923-1939.
Turner, L. M., M. A. White, D. Tautz, and B. A. Payseur (2014). Genomic networks of hybrid sterility. PLoS Genetics 10:e1004162.
2013
Payseur, B. A. (2013). Dissection of complex trait evolution (Section 5.13). Princeton Guide to Evolution. J. Losos, editor. Princeton University Press.
Wang, R., C. Ané, and B. A. Payseur (2013). The evolution of hybrid incompatibilities along a phylogeny. Evolution 67:2905-2922.
Cutter, A. D., and B. A. Payseur (2013). Genomic signatures of selection at linked sites: unifying the disparity among species. Nature Reviews Genetics 14:262-274.
Haasl, R. J., C. A. McCarty, and B. A. Payseur (2013). Genetic ancestry inference using support vector machines, and the active emergence of a unique American population. European Journal of Human Genetics 21:554-562.
Haasl, R. J., and B. A. Payseur (2013). Microsatellites as targets of natural selection. Molecular Biology and Evolution 30:285-298.
2012
Broman, K. W., S. Kim, S. Sen, C. Ané, and B. A. Payseur (2012). Mapping quantitative trait loci onto a phylogenetic tree. Genetics 192:267-279.
White, M. A., A. Ikeda, and B. A. Payseur (2012). A pronounced evolutionary shift of the pseudoautosomal region boundary in house mice. Mammalian Genome 23:454-466.
White, M. A., M. A. Stubbings, B. L. Dumont, and B. A. Payseur (2012). Genetics and evolution of hybrid male sterility in house mice. Genetics 191:917-934.
Nachman, M. W., and B. A. Payseur (2012). Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice. Philosophical Transactions of the Royal Society B 367:409-421.
2011
Keane, T. M., L. Goodstadt, P. Danecek, M. A. White, K. Wong, B. Yalcin, A. Heger, A. Agam, G. Slater, M. Goodson, N. A. Furotte, E. Eskin, C. Nellåker, H. Whitley, J. Cleak, D. Janowitz, P. Hernandez-Pliego, A. Edwards, T. G. Belgard, P. Oliver, R. E. McIntyre, A. Bhomra, J. Nicod, X. Gan, W. Yuan, L. v. d. Weyden, C. A. Steward, S. Balasubramaniam, J. Stalker, R. Mott, R. Durbin, I. Jackson, A. Czechanski, J. A. G. Assunção, L. R. Donahue, L. Reinholdt, B. A. Payseur, C. P. Ponting, E. Birney, J. Flint, and D. J. Adams (2011). Mouse genomic variation and its effect on phenotypes and gene regulation. Nature 477:289-294.
White, M. A., B. Steffy, T. Wiltshire, and B. A. Payseur (2011). Genetic dissection of a key reproductive barrier between nascent species of house mice. Genetics 169:289-304.
Dumont, B. L., and B. A. Payseur (2011). Genetic analysis of genome-scale recombination rate evolution in house mice. PLoS Genetics 7:e1002116.
Dumont, B. L., and B. A. Payseur (2011). Evolution of the genomic rate of recombination in murid rodents. Genetics 187:643-657.
Dumont, B. L., M. A. White, B. Steffy, T. Wiltshire, and B. A. Payseur (2011). Extensive recombination rate variation in the house mouse species complex inferred from genetic linkage maps. Genome Research 21:114-125.
Payseur, B. A., Jing, and R. J. Haasl (2011). A genomic portrait of human microsatellite variation. Molecular Biology and Evolution 28:303-312.
Haasl, R. J., and B. A. Payseur (2011). Multi-locus inference of population structure: A comparison between single nucleotide polymorphisms and microsatellites. Heredity 106:158-171.
2010
Haasl, R. J., and B. A. Payseur (2010). The number of alleles at a microsatellite defines the allele frequency spectrum and facilitates rapid, accurate estimation of theta. Molecular Biology and Evolution 27:2702-2715.
Payseur, B. A. (2010). Using differential introgression in hybrid zones to identify genomic regions involved in speciation. Molecular Ecology Resources 10:806-820.
Wong, A. K., A. L. Ruhe, B. L. Dumont, K. R. Robertson, Guerrero, S. M. Shull, J. S. Ziegle, L. V. Millon, K. W. Broman, B. A. Payseur, and M. W. Neff (2010). A comprehensive linkage map of the dog genome. Genetics 184:595-605.
2009
Shim, H., H. Chun, C. D. Engelman, and B. A. Payseur (2009). Genome-wide association studies using SNPs vs. haplotypes: An empirical comparison with data from the North American Rheumatoid Arthritis Consortium. BMC Proceedings 3 (Supp 7):S35.
White, M. A., C. Ané, C. N. Dewey, B. R. Larget, and B. A. Payseur (2009). Fine-scale phylogenetic discordance across the house mouse genome. PLoS Genetics 5: e1000729.
Moyle, L. C., and B. A. Payseur (2009). Reproductive isolation grows on trees. Trends in Ecology and Evolution 24:591-598.
Dumont, B. L., K. W. Broman, and B. A. Payseur (2009). Variation in genomic recombination rates among heterogeneous stock mice. Genetics 182:1345-1349.
Payseur, B. A., and P. Jing (2009). A genome-wide comparison of population structure at STRPs and nearby SNPs in humans. Molecular Biology and Evolution 26:1369-1377.
Payseur, B. A. (2009). Y not introgress? Insights into the genetics of speciation in European rabbits. Molecular Ecology 18:23-24.
2008
Vinyard, C. J., and B. A. Payseur (2008). Of “mice” and mammals: Utilizing classical inbred mice to study the genetic architecture of organismal-level function and performance in mammals. Integrative and Comparative Biology 48:324-337.
Payseur, B. A., M. Place, and J. L. Weber (2008). Linkage disequilibrium between STRPs and SNPs across the human genome. American Journal of Human Genetics 82:1039-1050.
Dumont, B. L., and B. A. Payseur (2008). Evolution of the genomic rate of recombination in mammals. Evolution 62:276-294.
Teeter, K. C., B. A. Payseur, L. W. Harris, M. A. Bakewell, L. M. Thibodeau, J. E. O’Brien, J. G. Krenz, M. Sans-Fuentes, M. W. Nachman, and P. K. Tucker (2008). Genome-wide patterns of gene flow across a house mouse hybrid zone. Genome Research 18:67-76.
2007
Williamson, S., M. Hubisz, A. G. Clark, B. A. Payseur, C. D. Bustamante, and R. Nielsen (2007). Localizing recent adaptive evolution in the human genome. PLoS Genetics 3:e90.
Payseur, B. A., and M. Place (2007). Searching the genomes of inbred mouse strains for incompatibilities that separate their wild relatives. Journal of Heredity 98:115-122.
Payseur, B. A., and M. Place (2007). Prospects for association mapping in classical inbred strains of mice. Genetics 175:1999–2008.
2006
Payseur, B. A., A. G. Clark, J. Hixson, E. Boerwinkle, and C. F. Sing (2006). Contrasting multi-site genotypic distributions among discordant quantitative phenotypes: the APOA1/C3/A4/A5 gene cluster and cardiovascular disease risk factors. Genetic Epidemiology 30:508-518.
Payseur, B. A., and A. D. Cutter (2006). Integrating patterns of polymorphism at SNPs and STRs. Trends in Genetics 22:424-429.
2005
Payseur, B. A., and H. E. Hoekstra (2005). Signatures of reproductive isolation in patterns of single nucleotide diversity across inbred strains of house mice. Genetics 171:1905-1916.